Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Gm6376-201ENSMUST00000209407 580 ntBASIC14.03□□□□□ -0.16
Cdkn2bP55271 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.03□□□□□ -0.16
Cdkn2bP55271 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Rps4l-201ENSMUST00000071745 943 ntBASIC14.03□□□□□ -0.16
Cdkn2bP55271 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.03□□□□□ -0.16
Cdkn2bP55271 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.03□□□□□ -0.16
Cdkn2bP55271 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkn2bP55271 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.02□□□□□ -0.16
Cdkn2bP55271 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkn2bP55271 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.02□□□□□ -0.17
Cdkn2bP55271 Gm2451-201ENSMUST00000199447 999 ntBASIC14.02□□□□□ -0.17
Cdkn2bP55271 Gm10290-201ENSMUST00000200451 999 ntBASIC14.02□□□□□ -0.17
Cdkn2bP55271 Olfr286-202ENSMUST00000205305 969 ntBASIC14.02□□□□□ -0.17
Cdkn2bP55271 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkn2bP55271 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Gm14042-201ENSMUST00000120139 833 ntBASIC14.01□□□□□ -0.17
Cdkn2bP55271 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.01□□□□□ -0.17
Cdkn2bP55271 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.01□□□□□ -0.17
Cdkn2bP55271 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.01□□□□□ -0.17
Cdkn2bP55271 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkn2bP55271 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms