Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.44■□□□□ 0.54
Msh6P54276 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Msh6P54276 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Msh6P54276 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh6P54276 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Msh6P54276 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Msh6P54276 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Gm9797-201ENSMUST00000052902 613 ntBASIC18.43■□□□□ 0.54
Msh6P54276 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.43■□□□□ 0.54
Msh6P54276 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.43■□□□□ 0.54
Msh6P54276 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Msh6P54276 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Msh6P54276 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh6P54276 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.43■□□□□ 0.54
Msh6P54276 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Msh6P54276 Gm28760-201ENSMUST00000185995 736 ntBASIC18.42■□□□□ 0.54
Msh6P54276 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.42■□□□□ 0.54
Msh6P54276 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Msh6P54276 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.42■□□□□ 0.54
Msh6P54276 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Msh6P54276 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.42■□□□□ 0.54
Msh6P54276 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.42■□□□□ 0.54
Msh6P54276 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Msh6P54276 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Msh6P54276 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh6P54276 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Msh6P54276 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Msh6P54276 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Msh6P54276 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Msh6P54276 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.41■□□□□ 0.54
Msh6P54276 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.41■□□□□ 0.54
Msh6P54276 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.41■□□□□ 0.54
Msh6P54276 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.41■□□□□ 0.54
Msh6P54276 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Msh6P54276 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.41■□□□□ 0.54
Msh6P54276 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh6P54276 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms