Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.17■□□□□ 0.18
Brca1P48754 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Brca1P48754 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Brca1P48754 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.17■□□□□ 0.18
Brca1P48754 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.17■□□□□ 0.18
Brca1P48754 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Brca1P48754 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Brca1P48754 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.16■□□□□ 0.18
Brca1P48754 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Brca1P48754 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Brca1P48754 Gm15429-201ENSMUST00000151268 798 ntBASIC16.16■□□□□ 0.18
Brca1P48754 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.16■□□□□ 0.18
Brca1P48754 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.16■□□□□ 0.18
Brca1P48754 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.16■□□□□ 0.18
Brca1P48754 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.16■□□□□ 0.18
Brca1P48754 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Brca1P48754 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.15■□□□□ 0.18
Brca1P48754 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Brca1P48754 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.15■□□□□ 0.18
Brca1P48754 Gm38241-201ENSMUST00000192641 898 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Gm7561-201ENSMUST00000211203 886 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.15■□□□□ 0.18
Brca1P48754 Gm8598-201ENSMUST00000221184 836 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.15■□□□□ 0.18
Brca1P48754 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Brca1P48754 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.15■□□□□ 0.18
Brca1P48754 Gm13689-201ENSMUST00000119360 685 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Gm11803-201ENSMUST00000119966 444 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.15■□□□□ 0.18
Brca1P48754 Gm18905-201ENSMUST00000205454 928 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Gm6983-201ENSMUST00000214912 628 ntBASIC16.15■□□□□ 0.18
Brca1P48754 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.15■□□□□ 0.18
Brca1P48754 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Brca1P48754 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Brca1P48754 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Brca1P48754 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Brca1P48754 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.14■□□□□ 0.17
Brca1P48754 Gm15236-201ENSMUST00000117309 379 ntBASIC16.14■□□□□ 0.17
Brca1P48754 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.14■□□□□ 0.17
Brca1P48754 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.14■□□□□ 0.17
Brca1P48754 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.14■□□□□ 0.17
Brca1P48754 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.14■□□□□ 0.17
Brca1P48754 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Brca1P48754 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.14■□□□□ 0.17
Brca1P48754 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms