Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.85□□□□□ -0.35
GdnfP48540 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
GdnfP48540 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.85□□□□□ -0.35
GdnfP48540 Rps4l-201ENSMUST00000071745 943 ntBASIC12.85□□□□□ -0.35
GdnfP48540 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.85□□□□□ -0.35
GdnfP48540 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.85□□□□□ -0.35
GdnfP48540 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GdnfP48540 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Gm14722-201ENSMUST00000118943 689 ntBASIC12.84□□□□□ -0.35
GdnfP48540 Mir8098-201ENSMUST00000184011 137 ntBASIC12.84□□□□□ -0.35
GdnfP48540 Gm27741-201ENSMUST00000185060 237 ntBASIC12.84□□□□□ -0.35
GdnfP48540 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
GdnfP48540 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GdnfP48540 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GdnfP48540 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.84□□□□□ -0.35
GdnfP48540 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
GdnfP48540 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GdnfP48540 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
GdnfP48540 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GdnfP48540 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GdnfP48540 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
GdnfP48540 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.83□□□□□ -0.36
GdnfP48540 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.83□□□□□ -0.36
GdnfP48540 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
GdnfP48540 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.83□□□□□ -0.36
GdnfP48540 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
GdnfP48540 Gm6089-201ENSMUST00000197666 938 ntBASIC12.83□□□□□ -0.36
GdnfP48540 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.83□□□□□ -0.36
GdnfP48540 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.83□□□□□ -0.36
GdnfP48540 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.83□□□□□ -0.36
GdnfP48540 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GdnfP48540 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GdnfP48540 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GdnfP48540 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.83□□□□□ -0.36
GdnfP48540 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.82□□□□□ -0.36
GdnfP48540 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
GdnfP48540 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms