Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Prox1P48437 Gm15358-201ENSMUST00000119249 520 ntBASIC14.08□□□□□ -0.16
Prox1P48437 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.08□□□□□ -0.16
Prox1P48437 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Prox1P48437 Gm8318-201ENSMUST00000182954 872 ntBASIC14.08□□□□□ -0.16
Prox1P48437 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Prox1P48437 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prox1P48437 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.08□□□□□ -0.16
Prox1P48437 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Prox1P48437 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.08□□□□□ -0.16
Prox1P48437 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Matn2-206ENSMUST00000228570 2798 ntBASIC14.08□□□□□ -0.16
Prox1P48437 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prox1P48437 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.08□□□□□ -0.16
Prox1P48437 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.07□□□□□ -0.16
Prox1P48437 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.07□□□□□ -0.16
Prox1P48437 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.07□□□□□ -0.16
Prox1P48437 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.07□□□□□ -0.16
Prox1P48437 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prox1P48437 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Prox1P48437 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.06□□□□□ -0.16
Prox1P48437 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.06□□□□□ -0.16
Prox1P48437 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Prox1P48437 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Gm8097-201ENSMUST00000117903 829 ntBASIC14.06□□□□□ -0.16
Prox1P48437 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.06□□□□□ -0.16
Prox1P48437 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.06□□□□□ -0.16
Prox1P48437 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.06□□□□□ -0.16
Prox1P48437 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.06□□□□□ -0.16
Prox1P48437 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prox1P48437 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prox1P48437 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.05□□□□□ -0.16
Prox1P48437 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Prox1P48437 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prox1P48437 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.05□□□□□ -0.16
Prox1P48437 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prox1P48437 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prox1P48437 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms