Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gm9002-201ENSMUST00000178437 499 ntBASIC12.67□□□□□ -0.38
TgfaP48030 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.67□□□□□ -0.38
TgfaP48030 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Mir125a-201ENSMUST00000083545 68 ntBASIC12.67□□□□□ -0.38
TgfaP48030 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TgfaP48030 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TgfaP48030 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TgfaP48030 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.67□□□□□ -0.38
TgfaP48030 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.66□□□□□ -0.38
TgfaP48030 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.66□□□□□ -0.38
TgfaP48030 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TgfaP48030 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TgfaP48030 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TgfaP48030 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Gm17150-201ENSMUST00000165577 381 ntBASIC12.66□□□□□ -0.38
TgfaP48030 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TgfaP48030 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TgfaP48030 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.66□□□□□ -0.38
TgfaP48030 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.66□□□□□ -0.38
TgfaP48030 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TgfaP48030 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TgfaP48030 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.65□□□□□ -0.38
TgfaP48030 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TgfaP48030 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Gm4984-201ENSMUST00000115987 360 ntBASIC12.65□□□□□ -0.38
TgfaP48030 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.65□□□□□ -0.38
TgfaP48030 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.65□□□□□ -0.38
TgfaP48030 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.65□□□□□ -0.38
TgfaP48030 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.65□□□□□ -0.38
TgfaP48030 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.65□□□□□ -0.38
TgfaP48030 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Gm2451-201ENSMUST00000199447 999 ntBASIC12.65□□□□□ -0.38
TgfaP48030 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.65□□□□□ -0.38
TgfaP48030 Gm10290-201ENSMUST00000200451 999 ntBASIC12.65□□□□□ -0.38
TgfaP48030 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TgfaP48030 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TgfaP48030 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
TgfaP48030 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TgfaP48030 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TgfaP48030 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TgfaP48030 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TgfaP48030 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TgfaP48030 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TgfaP48030 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
TgfaP48030 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TgfaP48030 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TgfaP48030 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TgfaP48030 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms