Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.85□□□□□ -0.19
Cdx2P43241 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.84□□□□□ -0.19
Cdx2P43241 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdx2P43241 Gm33320-201ENSMUST00000192232 530 ntBASIC13.84□□□□□ -0.19
Cdx2P43241 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdx2P43241 Gm19220-201ENSMUST00000222682 803 ntBASIC13.84□□□□□ -0.19
Cdx2P43241 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cdx2P43241 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.84□□□□□ -0.19
Cdx2P43241 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 BC001981-202ENSMUST00000191393 1545 ntBASIC13.84□□□□□ -0.19
Cdx2P43241 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdx2P43241 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx2P43241 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.83□□□□□ -0.19
Cdx2P43241 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdx2P43241 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Cdx2P43241 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdx2P43241 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.83□□□□□ -0.2
Cdx2P43241 Gm15393-201ENSMUST00000120499 219 ntBASIC13.83□□□□□ -0.2
Cdx2P43241 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdx2P43241 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Gm6266-201ENSMUST00000203844 806 ntBASIC13.83□□□□□ -0.2
Cdx2P43241 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdx2P43241 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.83□□□□□ -0.2
Cdx2P43241 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Cdx2P43241 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdx2P43241 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdx2P43241 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdx2P43241 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdx2P43241 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx2P43241 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cdx2P43241 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Cdx2P43241 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.82□□□□□ -0.2
Cdx2P43241 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.82□□□□□ -0.2
Cdx2P43241 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdx2P43241 Gm15806-201ENSMUST00000120696 955 ntBASIC13.82□□□□□ -0.2
Cdx2P43241 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx2P43241 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdx2P43241 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms