Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
HttP42859 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.3■□□□□ 0.04
HttP42859 Gm6621-201ENSMUST00000193251 772 ntBASIC15.3■□□□□ 0.04
HttP42859 Rps4l-202ENSMUST00000204242 789 ntBASIC15.3■□□□□ 0.04
HttP42859 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.3■□□□□ 0.04
HttP42859 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HttP42859 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm6082-201ENSMUST00000215204 454 ntBASIC15.29■□□□□ 0.04
HttP42859 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.29■□□□□ 0.04
HttP42859 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.29■□□□□ 0.04
HttP42859 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HttP42859 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HttP42859 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HttP42859 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.28■□□□□ 0.04
HttP42859 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.28■□□□□ 0.04
HttP42859 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.28■□□□□ 0.04
HttP42859 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HttP42859 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HttP42859 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HttP42859 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HttP42859 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HttP42859 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HttP42859 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Gm6152-201ENSMUST00000151704 340 ntBASIC15.28■□□□□ 0.04
HttP42859 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Gm7029-201ENSMUST00000173226 450 ntBASIC15.28■□□□□ 0.04
HttP42859 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HttP42859 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HttP42859 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.28■□□□□ 0.04
HttP42859 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HttP42859 Mir433-201ENSMUST00000093564 124 ntBASIC15.28■□□□□ 0.04
HttP42859 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.28■□□□□ 0.04
HttP42859 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HttP42859 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.27■□□□□ 0.04
HttP42859 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.27■□□□□ 0.04
HttP42859 Gm24255-201ENSMUST00000104481 128 ntBASIC15.27■□□□□ 0.04
HttP42859 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.27■□□□□ 0.04
HttP42859 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.27■□□□□ 0.04
HttP42859 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.27■□□□□ 0.04
HttP42859 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.27■□□□□ 0.04
HttP42859 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HttP42859 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HttP42859 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HttP42859 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.27■□□□□ 0.03
HttP42859 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.27■□□□□ 0.03
HttP42859 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.27■□□□□ 0.03
HttP42859 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HttP42859 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HttP42859 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms