Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm11814-201ENSMUST00000119515 929 ntBASIC14.97□□□□□ -0.01
Cxcl12P40224 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm4804-201ENSMUST00000182234 999 ntBASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm27847-201ENSMUST00000183711 107 ntBASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm27375-201ENSMUST00000183799 107 ntBASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm21470-201ENSMUST00000187680 696 ntBASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.97□□□□□ -0.01
Cxcl12P40224 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.96□□□□□ -0.01
Cxcl12P40224 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Cxcl12P40224 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.96□□□□□ -0.01
Cxcl12P40224 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.96□□□□□ -0.01
Cxcl12P40224 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.96□□□□□ -0.01
Cxcl12P40224 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl12P40224 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cxcl12P40224 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cxcl12P40224 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cxcl12P40224 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cxcl12P40224 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cxcl12P40224 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cxcl12P40224 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.95□□□□□ -0.02
Cxcl12P40224 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Gm5425-201ENSMUST00000214125 459 ntBASIC14.95□□□□□ -0.02
Cxcl12P40224 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.95□□□□□ -0.02
Cxcl12P40224 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cxcl12P40224 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl12P40224 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Cxcl12P40224 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.94□□□□□ -0.02
Cxcl12P40224 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.94□□□□□ -0.02
Cxcl12P40224 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cxcl12P40224 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms