Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RetP35546 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.72□□□□□ -0.21
RetP35546 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RetP35546 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.71□□□□□ -0.21
RetP35546 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.71□□□□□ -0.21
RetP35546 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.71□□□□□ -0.21
RetP35546 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RetP35546 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RetP35546 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.71□□□□□ -0.21
RetP35546 Mir449b-201ENSMUST00000104833 80 ntBASIC13.71□□□□□ -0.21
RetP35546 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.71□□□□□ -0.21
RetP35546 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RetP35546 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.71□□□□□ -0.21
RetP35546 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RetP35546 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RetP35546 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RetP35546 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RetP35546 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RetP35546 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RetP35546 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.71□□□□□ -0.22
RetP35546 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.71□□□□□ -0.22
RetP35546 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RetP35546 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RetP35546 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RetP35546 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.7□□□□□ -0.22
RetP35546 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.7□□□□□ -0.22
RetP35546 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Gm7774-201ENSMUST00000200064 533 ntBASIC13.7□□□□□ -0.22
RetP35546 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.7□□□□□ -0.22
RetP35546 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.7□□□□□ -0.22
RetP35546 Gm18246-201ENSMUST00000221023 728 ntBASIC13.7□□□□□ -0.22
RetP35546 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.7□□□□□ -0.22
RetP35546 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.7□□□□□ -0.22
RetP35546 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RetP35546 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RetP35546 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RetP35546 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RetP35546 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RetP35546 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.69□□□□□ -0.22
RetP35546 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.69□□□□□ -0.22
RetP35546 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.69□□□□□ -0.22
RetP35546 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.69□□□□□ -0.22
RetP35546 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RetP35546 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RetP35546 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms