Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15□□□□□ -0.01
Mmp13P33435 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Mmp13P33435 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.99□□□□□ -0.01
Mmp13P33435 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Mmp13P33435 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.99□□□□□ -0.01
Mmp13P33435 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.99□□□□□ -0.01
Mmp13P33435 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.99□□□□□ -0.01
Mmp13P33435 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Mmp13P33435 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Mmp13P33435 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Mmp13P33435 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.99□□□□□ -0.01
Mmp13P33435 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Mmp13P33435 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.99□□□□□ -0.01
Mmp13P33435 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp13P33435 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Mmp13P33435 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Mmp13P33435 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Mmp13P33435 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Mmp13P33435 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm15467-201ENSMUST00000120582 445 ntBASIC14.98□□□□□ -0.01
Mmp13P33435 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.98□□□□□ -0.01
Mmp13P33435 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm9727-201ENSMUST00000161387 555 ntBASIC14.98□□□□□ -0.01
Mmp13P33435 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.98□□□□□ -0.01
Mmp13P33435 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.98□□□□□ -0.01
Mmp13P33435 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp13P33435 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.98□□□□□ -0.01
Mmp13P33435 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp13P33435 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms