Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Gm12895-201ENSMUST00000122214 226 ntBASIC12.61□□□□□ -0.39
Slc6a1P31648 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc6a1P31648 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a1P31648 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.61□□□□□ -0.39
Slc6a1P31648 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc6a1P31648 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.61□□□□□ -0.39
Slc6a1P31648 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a1P31648 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Slc6a1P31648 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a1P31648 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Slc6a1P31648 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.6□□□□□ -0.39
Slc6a1P31648 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a1P31648 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a1P31648 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Slc6a1P31648 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.59□□□□□ -0.39
Slc6a1P31648 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Slc6a1P31648 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Slc6a1P31648 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.59□□□□□ -0.39
Slc6a1P31648 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.59□□□□□ -0.39
Slc6a1P31648 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc6a1P31648 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms