Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vcam1P29533 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vcam1P29533 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vcam1P29533 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.75■□□□□ 0.27
Vcam1P29533 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.75■□□□□ 0.27
Vcam1P29533 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vcam1P29533 Gm10766-202ENSMUST00000194123 606 ntBASIC16.75■□□□□ 0.27
Vcam1P29533 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.75■□□□□ 0.27
Vcam1P29533 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vcam1P29533 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vcam1P29533 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.75■□□□□ 0.27
Vcam1P29533 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Vcam1P29533 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vcam1P29533 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vcam1P29533 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.74■□□□□ 0.27
Vcam1P29533 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vcam1P29533 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Gm15460-201ENSMUST00000118147 391 ntBASIC16.74■□□□□ 0.27
Vcam1P29533 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.74■□□□□ 0.27
Vcam1P29533 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.74■□□□□ 0.27
Vcam1P29533 Gm12882-201ENSMUST00000121696 517 ntBASIC16.74■□□□□ 0.27
Vcam1P29533 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.74■□□□□ 0.27
Vcam1P29533 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Vcam1P29533 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.74■□□□□ 0.27
Vcam1P29533 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Gm9797-201ENSMUST00000052902 613 ntBASIC16.74■□□□□ 0.27
Vcam1P29533 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vcam1P29533 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Efs-202ENSMUST00000227037 2540 ntBASIC16.74■□□□□ 0.27
Vcam1P29533 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vcam1P29533 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Vcam1P29533 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vcam1P29533 Gm6912-201ENSMUST00000117218 544 ntBASIC16.73■□□□□ 0.27
Vcam1P29533 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vcam1P29533 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Vcam1P29533 Gm6180-201ENSMUST00000065243 498 ntBASIC16.73■□□□□ 0.27
Vcam1P29533 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vcam1P29533 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vcam1P29533 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Vcam1P29533 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vcam1P29533 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Vcam1P29533 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vcam1P29533 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Vcam1P29533 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
Vcam1P29533 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Vcam1P29533 Gm12585-201ENSMUST00000117307 290 ntBASIC16.72■□□□□ 0.27
Vcam1P29533 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.72■□□□□ 0.27
Vcam1P29533 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.72■□□□□ 0.27
Vcam1P29533 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.72■□□□□ 0.27
Vcam1P29533 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.72■□□□□ 0.27
Vcam1P29533 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Vcam1P29533 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vcam1P29533 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms