Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl6P27784 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl6P27784 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl6P27784 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccl6P27784 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Ccl6P27784 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl6P27784 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl6P27784 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.42□□□□□ -0.58
Ccl6P27784 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Gm14140-201ENSMUST00000119999 995 ntBASIC11.42□□□□□ -0.58
Ccl6P27784 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccl6P27784 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccl6P27784 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccl6P27784 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl6P27784 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl6P27784 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccl6P27784 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 Gm12008-201ENSMUST00000117791 755 ntBASIC11.41□□□□□ -0.58
Ccl6P27784 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccl6P27784 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.41□□□□□ -0.58
Ccl6P27784 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccl6P27784 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccl6P27784 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccl6P27784 Psmb5-202ENSMUST00000227257 622 ntBASIC11.41□□□□□ -0.58
Ccl6P27784 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ccl6P27784 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl6P27784 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Ccl6P27784 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl6P27784 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.4□□□□□ -0.58
Ccl6P27784 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.4□□□□□ -0.58
Ccl6P27784 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ccl6P27784 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl6P27784 Gm12260-201ENSMUST00000122447 411 ntBASIC11.4□□□□□ -0.58
Ccl6P27784 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms