Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TP20293 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.8□□□□□ -0.2
TP20293 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TP20293 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TP20293 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.8□□□□□ -0.2
TP20293 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.8□□□□□ -0.2
TP20293 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TP20293 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TP20293 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Efs-202ENSMUST00000227037 2540 ntBASIC13.8□□□□□ -0.2
TP20293 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
TP20293 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TP20293 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.79□□□□□ -0.2
TP20293 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.79□□□□□ -0.2
TP20293 Gm5177-201ENSMUST00000183092 997 ntBASIC13.79□□□□□ -0.2
TP20293 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.79□□□□□ -0.2
TP20293 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.79□□□□□ -0.2
TP20293 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.79□□□□□ -0.2
TP20293 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.79□□□□□ -0.2
TP20293 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TP20293 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TP20293 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.79□□□□□ -0.2
TP20293 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TP20293 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TP20293 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Gm8000-201ENSMUST00000188378 592 ntBASIC13.78□□□□□ -0.2
TP20293 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TP20293 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.78□□□□□ -0.2
TP20293 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.78□□□□□ -0.2
TP20293 Thap2-203ENSMUST00000218989 527 ntBASIC13.78□□□□□ -0.2
TP20293 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.78□□□□□ -0.2
TP20293 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.78□□□□□ -0.2
TP20293 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.78□□□□□ -0.2
TP20293 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TP20293 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TP20293 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.78□□□□□ -0.2
TP20293 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TP20293 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.78□□□□□ -0.2
TP20293 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TP20293 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TP20293 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TP20293 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TP20293 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms