Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgn1P18608 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.4□□□□□ -0.26
Hmgn1P18608 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Gm8749-201ENSMUST00000117737 331 ntBASIC13.4□□□□□ -0.26
Hmgn1P18608 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Hmgn1P18608 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.4□□□□□ -0.26
Hmgn1P18608 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Hmgn1P18608 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hmgn1P18608 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.4□□□□□ -0.26
Hmgn1P18608 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmgn1P18608 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm7284-201ENSMUST00000131667 944 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.39□□□□□ -0.27
Hmgn1P18608 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hmgn1P18608 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmgn1P18608 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hmgn1P18608 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.39□□□□□ -0.27
Hmgn1P18608 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.38□□□□□ -0.27
Hmgn1P18608 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmgn1P18608 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Hmgn1P18608 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms