Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sod1P08228 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sod1P08228 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sod1P08228 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.67□□□□□ -0.22
Sod1P08228 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sod1P08228 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sod1P08228 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.67□□□□□ -0.22
Sod1P08228 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sod1P08228 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sod1P08228 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.66□□□□□ -0.22
Sod1P08228 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sod1P08228 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sod1P08228 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.66□□□□□ -0.22
Sod1P08228 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sod1P08228 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.66□□□□□ -0.22
Sod1P08228 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.66□□□□□ -0.22
Sod1P08228 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.66□□□□□ -0.22
Sod1P08228 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sod1P08228 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.66□□□□□ -0.22
Sod1P08228 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.66□□□□□ -0.22
Sod1P08228 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sod1P08228 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.66□□□□□ -0.22
Sod1P08228 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.65□□□□□ -0.22
Sod1P08228 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sod1P08228 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.65□□□□□ -0.22
Sod1P08228 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sod1P08228 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.65□□□□□ -0.22
Sod1P08228 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.65□□□□□ -0.22
Sod1P08228 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.65□□□□□ -0.22
Sod1P08228 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sod1P08228 Gm8602-201ENSMUST00000184045 607 ntBASIC13.65□□□□□ -0.22
Sod1P08228 Gm21470-201ENSMUST00000187680 696 ntBASIC13.65□□□□□ -0.22
Sod1P08228 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.65□□□□□ -0.22
Sod1P08228 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.65□□□□□ -0.22
Sod1P08228 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sod1P08228 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.65□□□□□ -0.22
Sod1P08228 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sod1P08228 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.65□□□□□ -0.22
Sod1P08228 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Sod1P08228 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sod1P08228 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.64□□□□□ -0.23
Sod1P08228 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.64□□□□□ -0.23
Sod1P08228 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sod1P08228 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sod1P08228 Gm15678-201ENSMUST00000117573 960 ntBASIC13.64□□□□□ -0.23
Sod1P08228 Gm12341-201ENSMUST00000119724 503 ntBASIC13.64□□□□□ -0.23
Sod1P08228 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.64□□□□□ -0.23
Sod1P08228 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.64□□□□□ -0.23
Sod1P08228 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sod1P08228 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms