Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Best1O88870 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Best1O88870 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Best1O88870 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Best1O88870 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Best1O88870 Gm12428-201ENSMUST00000119844 727 ntBASIC14.04□□□□□ -0.16
Best1O88870 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.04□□□□□ -0.16
Best1O88870 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.04□□□□□ -0.16
Best1O88870 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Best1O88870 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Best1O88870 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.04□□□□□ -0.16
Best1O88870 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.04□□□□□ -0.16
Best1O88870 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Best1O88870 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.04□□□□□ -0.16
Best1O88870 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Best1O88870 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Best1O88870 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Gm12882-201ENSMUST00000121696 517 ntBASIC14.03□□□□□ -0.16
Best1O88870 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.03□□□□□ -0.16
Best1O88870 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.03□□□□□ -0.16
Best1O88870 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.03□□□□□ -0.16
Best1O88870 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.03□□□□□ -0.16
Best1O88870 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.03□□□□□ -0.16
Best1O88870 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.03□□□□□ -0.16
Best1O88870 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Best1O88870 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Best1O88870 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Best1O88870 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Best1O88870 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Best1O88870 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Best1O88870 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Best1O88870 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Best1O88870 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.02□□□□□ -0.16
Best1O88870 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Best1O88870 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Best1O88870 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Best1O88870 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Mir1897-201ENSMUST00000122581 272 ntBASIC14.02□□□□□ -0.17
Best1O88870 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Best1O88870 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.02□□□□□ -0.17
Best1O88870 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.02□□□□□ -0.17
Best1O88870 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms