Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.32□□□□□ -0.12
ClppO88696 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.32□□□□□ -0.12
ClppO88696 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.32□□□□□ -0.12
ClppO88696 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.32□□□□□ -0.12
ClppO88696 Gm20553-201ENSMUST00000204205 844 ntBASIC14.32□□□□□ -0.12
ClppO88696 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.32□□□□□ -0.12
ClppO88696 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
ClppO88696 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.32□□□□□ -0.12
ClppO88696 Gm10154-201ENSMUST00000084445 354 ntBASIC14.32□□□□□ -0.12
ClppO88696 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ClppO88696 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ClppO88696 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.31□□□□□ -0.12
ClppO88696 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.31□□□□□ -0.12
ClppO88696 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ClppO88696 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.31□□□□□ -0.12
ClppO88696 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Gm25287-201ENSMUST00000103846 110 ntBASIC14.31□□□□□ -0.12
ClppO88696 Gm22918-201ENSMUST00000103855 110 ntBASIC14.31□□□□□ -0.12
ClppO88696 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Gm13616-201ENSMUST00000120600 222 ntBASIC14.31□□□□□ -0.12
ClppO88696 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.31□□□□□ -0.12
ClppO88696 Mir6956-201ENSMUST00000183598 62 ntBASIC14.31□□□□□ -0.12
ClppO88696 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.31□□□□□ -0.12
ClppO88696 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.31□□□□□ -0.12
ClppO88696 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ClppO88696 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ClppO88696 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ClppO88696 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ClppO88696 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClppO88696 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ClppO88696 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
ClppO88696 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.3□□□□□ -0.12
ClppO88696 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.3□□□□□ -0.12
ClppO88696 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.3□□□□□ -0.12
ClppO88696 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ClppO88696 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.3□□□□□ -0.12
ClppO88696 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.3□□□□□ -0.12
ClppO88696 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.3□□□□□ -0.12
ClppO88696 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ClppO88696 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
ClppO88696 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.3□□□□□ -0.12
ClppO88696 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClppO88696 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms