Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ttc3O88196 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ttc3O88196 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ttc3O88196 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Ttc3O88196 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ttc3O88196 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.24■□□□□ 0.03
Ttc3O88196 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.24■□□□□ 0.03
Ttc3O88196 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.24■□□□□ 0.03
Ttc3O88196 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.24■□□□□ 0.03
Ttc3O88196 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.23■□□□□ 0.03
Ttc3O88196 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ttc3O88196 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ttc3O88196 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ttc3O88196 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.23■□□□□ 0.03
Ttc3O88196 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.23■□□□□ 0.03
Ttc3O88196 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Ttc3O88196 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ttc3O88196 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ttc3O88196 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ttc3O88196 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Ttc3O88196 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ttc3O88196 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ttc3O88196 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ttc3O88196 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.22■□□□□ 0.03
Ttc3O88196 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.22■□□□□ 0.03
Ttc3O88196 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.22■□□□□ 0.03
Ttc3O88196 Gm20445-201ENSMUST00000061905 565 ntBASIC15.22■□□□□ 0.03
Ttc3O88196 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ttc3O88196 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ttc3O88196 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.21■□□□□ 0.03
Ttc3O88196 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.21■□□□□ 0.03
Ttc3O88196 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ttc3O88196 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ttc3O88196 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.21■□□□□ 0.02
Ttc3O88196 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ttc3O88196 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ttc3O88196 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.2■□□□□ 0.02
Ttc3O88196 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms