Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim3O70209 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.28□□□□□ -0.28
Pdlim3O70209 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim3O70209 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim3O70209 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim3O70209 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pdlim3O70209 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pdlim3O70209 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.27□□□□□ -0.28
Pdlim3O70209 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Pdlim3O70209 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim3O70209 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim3O70209 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim3O70209 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.27□□□□□ -0.29
Pdlim3O70209 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Gm33142-201ENSMUST00000193913 867 ntBASIC13.27□□□□□ -0.29
Pdlim3O70209 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.27□□□□□ -0.29
Pdlim3O70209 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim3O70209 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.26□□□□□ -0.29
Pdlim3O70209 Gm37153-201ENSMUST00000193637 231 ntBASIC13.26□□□□□ -0.29
Pdlim3O70209 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.26□□□□□ -0.29
Pdlim3O70209 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim3O70209 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim3O70209 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.25□□□□□ -0.29
Pdlim3O70209 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.25□□□□□ -0.29
Pdlim3O70209 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim3O70209 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.25□□□□□ -0.29
Pdlim3O70209 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.25□□□□□ -0.29
Pdlim3O70209 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim3O70209 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.25□□□□□ -0.29
Pdlim3O70209 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms