Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl35aO55142 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl35aO55142 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl35aO55142 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl35aO55142 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpl35aO55142 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Asic1-205ENSMUST00000228185 1818 ntBASIC10.91□□□□□ -0.66
Rpl35aO55142 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.91□□□□□ -0.66
Rpl35aO55142 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.91□□□□□ -0.66
Rpl35aO55142 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Rpl35aO55142 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl35aO55142 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Rprl2-201ENSMUST00000157150 290 ntBASIC10.9□□□□□ -0.66
Rpl35aO55142 Rpph1-201ENSMUST00000175096 319 ntBASIC10.9□□□□□ -0.66
Rpl35aO55142 Chchd1-203ENSMUST00000224633 557 ntBASIC10.9□□□□□ -0.66
Rpl35aO55142 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.9□□□□□ -0.66
Rpl35aO55142 BC037039-201ENSMUST00000192003 2205 ntBASIC10.9□□□□□ -0.66
Rpl35aO55142 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Rpl35aO55142 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Rpl35aO55142 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.9□□□□□ -0.66
Rpl35aO55142 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl35aO55142 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl35aO55142 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl35aO55142 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl35aO55142 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl35aO55142 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl35aO55142 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms