Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Rnf13O54965 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf13O54965 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rnf13O54965 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf13O54965 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rnf13O54965 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf13O54965 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rnf13O54965 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf13O54965 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf13O54965 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Rnf13O54965 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rnf13O54965 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.27□□□□□ -0.29
Rnf13O54965 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.27□□□□□ -0.29
Rnf13O54965 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.27□□□□□ -0.29
Rnf13O54965 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rnf13O54965 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf13O54965 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf13O54965 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf13O54965 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf13O54965 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.27□□□□□ -0.29
Rnf13O54965 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf13O54965 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.26□□□□□ -0.29
Rnf13O54965 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.26□□□□□ -0.29
Rnf13O54965 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.26□□□□□ -0.29
Rnf13O54965 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.26□□□□□ -0.29
Rnf13O54965 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.26□□□□□ -0.29
Rnf13O54965 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.26□□□□□ -0.29
Rnf13O54965 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rnf13O54965 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf13O54965 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf13O54965 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Rnf13O54965 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rnf13O54965 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf13O54965 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.25□□□□□ -0.29
Rnf13O54965 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf13O54965 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf13O54965 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf13O54965 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.25□□□□□ -0.29
Rnf13O54965 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Rnf13O54965 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf13O54965 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf13O54965 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms