Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sptlc1O35704 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sptlc1O35704 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sptlc1O35704 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sptlc1O35704 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sptlc1O35704 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sptlc1O35704 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sptlc1O35704 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Mir1897-201ENSMUST00000122581 272 ntBASIC16.06■□□□□ 0.16
Sptlc1O35704 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Gm22119-201ENSMUST00000175594 99 ntBASIC16.06■□□□□ 0.16
Sptlc1O35704 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Sptlc1O35704 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.06■□□□□ 0.16
Sptlc1O35704 Gm43553-201ENSMUST00000200900 685 ntBASIC16.06■□□□□ 0.16
Sptlc1O35704 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sptlc1O35704 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sptlc1O35704 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sptlc1O35704 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sptlc1O35704 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm7488-201ENSMUST00000117148 684 ntBASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm44855-201ENSMUST00000205725 362 ntBASIC16.05■□□□□ 0.16
Sptlc1O35704 Gm16476-201ENSMUST00000221544 139 ntBASIC16.05■□□□□ 0.16
Sptlc1O35704 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.05■□□□□ 0.16
Sptlc1O35704 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sptlc1O35704 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sptlc1O35704 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sptlc1O35704 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.04■□□□□ 0.16
Sptlc1O35704 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm15321-201ENSMUST00000121290 288 ntBASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm29013-201ENSMUST00000187431 237 ntBASIC16.04■□□□□ 0.16
Sptlc1O35704 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC16.04■□□□□ 0.16
Sptlc1O35704 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.04■□□□□ 0.16
Sptlc1O35704 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sptlc1O35704 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sptlc1O35704 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms