Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Clk4O35493 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clk4O35493 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Gm15427-201ENSMUST00000117288 531 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.08□□□□□ -0.16
Clk4O35493 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clk4O35493 Gm17968-201ENSMUST00000194902 784 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Gm2756-201ENSMUST00000195851 400 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Gm44492-201ENSMUST00000197012 141 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.08□□□□□ -0.16
Clk4O35493 Gm45747-201ENSMUST00000212203 999 ntBASIC14.08□□□□□ -0.16
Clk4O35493 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Clk4O35493 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clk4O35493 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clk4O35493 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk4O35493 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.07□□□□□ -0.16
Clk4O35493 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Clk4O35493 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.07□□□□□ -0.16
Clk4O35493 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.07□□□□□ -0.16
Clk4O35493 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.07□□□□□ -0.16
Clk4O35493 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.07□□□□□ -0.16
Clk4O35493 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.07□□□□□ -0.16
Clk4O35493 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.07□□□□□ -0.16
Clk4O35493 Gm10154-201ENSMUST00000084445 354 ntBASIC14.07□□□□□ -0.16
Clk4O35493 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clk4O35493 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clk4O35493 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clk4O35493 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Clk4O35493 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk4O35493 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Gm16198-201ENSMUST00000118766 670 ntBASIC14.06□□□□□ -0.16
Clk4O35493 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Clk4O35493 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.06□□□□□ -0.16
Clk4O35493 Gm16026-204ENSMUST00000162652 683 ntBASIC14.06□□□□□ -0.16
Clk4O35493 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.06□□□□□ -0.16
Clk4O35493 Gm2213-201ENSMUST00000197485 688 ntBASIC14.06□□□□□ -0.16
Clk4O35493 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.06□□□□□ -0.16
Clk4O35493 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.06□□□□□ -0.16
Clk4O35493 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.06□□□□□ -0.16
Clk4O35493 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Clk4O35493 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.06□□□□□ -0.16
Clk4O35493 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk4O35493 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clk4O35493 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms