Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcn6O35454 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.03■□□□□ 0.16
Clcn6O35454 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Clcn6O35454 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Clcn6O35454 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.02■□□□□ 0.16
Clcn6O35454 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Clcn6O35454 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC16.02■□□□□ 0.16
Clcn6O35454 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Clcn6O35454 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.02■□□□□ 0.16
Clcn6O35454 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC16.02■□□□□ 0.16
Clcn6O35454 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC16.02■□□□□ 0.16
Clcn6O35454 Gm16456-201ENSMUST00000174431 920 ntBASIC16.02■□□□□ 0.16
Clcn6O35454 Gm20177-201ENSMUST00000203705 334 ntBASIC16.02■□□□□ 0.16
Clcn6O35454 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC16.02■□□□□ 0.16
Clcn6O35454 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Clcn6O35454 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clcn6O35454 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Gm42975-201ENSMUST00000200612 1491 ntBASIC16.02■□□□□ 0.15
Clcn6O35454 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Clcn6O35454 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Clcn6O35454 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Clcn6O35454 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Clcn6O35454 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Clcn6O35454 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Clcn6O35454 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Clcn6O35454 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.01■□□□□ 0.15
Clcn6O35454 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.01■□□□□ 0.15
Clcn6O35454 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.01■□□□□ 0.15
Clcn6O35454 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC16.01■□□□□ 0.15
Clcn6O35454 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.01■□□□□ 0.15
Clcn6O35454 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC16.01■□□□□ 0.15
Clcn6O35454 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.01■□□□□ 0.15
Clcn6O35454 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Gm18300-201ENSMUST00000192792 1406 ntBASIC16.01■□□□□ 0.15
Clcn6O35454 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Clcn6O35454 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Clcn6O35454 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Clcn6O35454 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Clcn6O35454 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16■□□□□ 0.15
Clcn6O35454 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16■□□□□ 0.15
Clcn6O35454 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16■□□□□ 0.15
Clcn6O35454 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16■□□□□ 0.15
Clcn6O35454 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Gm15379-201ENSMUST00000121224 648 ntBASIC16■□□□□ 0.15
Clcn6O35454 Olfr129-201ENSMUST00000122318 993 ntBASIC16■□□□□ 0.15
Clcn6O35454 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Clcn6O35454 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms