Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Gm25857-201ENSMUST00000082788 129 ntBASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Pcf11G3X9Z4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Gm26464-201ENSMUST00000157094 305 ntBASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Mir7085-201ENSMUST00000184353 66 ntBASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Gm7067-201ENSMUST00000207698 1249 ntBASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcf11G3X9Z4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Gm12960-201ENSMUST00000120017 1066 ntBASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcf11G3X9Z4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcf11G3X9Z4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcf11G3X9Z4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcf11G3X9Z4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcf11G3X9Z4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcf11G3X9Z4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Gm4804-201ENSMUST00000182234 999 ntBASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Gm37748-201ENSMUST00000194379 1140 ntBASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Gm45630-201ENSMUST00000210243 1911 ntBASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcf11G3X9Z4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Gm42471-201ENSMUST00000201457 1865 ntBASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Gm13385-201ENSMUST00000121089 220 ntBASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Gm28911-201ENSMUST00000188837 117 ntBASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pcf11G3X9Z4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms