Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm38294-201ENSMUST00000192831 381 ntBASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Gm10275-201ENSMUST00000092620 635 ntBASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Gm27622-201ENSMUST00000183779 60 ntBASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb9E9Q5G2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Gm9719-201ENSMUST00000162765 543 ntBASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.18■□□□□ 0.34
Pcdhb9E9Q5G2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Gm13223-201ENSMUST00000118609 747 ntBASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb9E9Q5G2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Gm8410-201ENSMUST00000117225 605 ntBASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms