Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm4862-201ENSMUST00000170405 438 ntBASIC8□□□□□ -1.13
Herc1E9PZP8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC8□□□□□ -1.13
Herc1E9PZP8 Gm8762-201ENSMUST00000193486 339 ntBASIC8□□□□□ -1.13
Herc1E9PZP8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC8□□□□□ -1.13
Herc1E9PZP8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
Herc1E9PZP8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC8□□□□□ -1.13
Herc1E9PZP8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC8□□□□□ -1.13
Herc1E9PZP8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC8□□□□□ -1.13
Herc1E9PZP8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Herc1E9PZP8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC8□□□□□ -1.13
Herc1E9PZP8 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC8□□□□□ -1.13
Herc1E9PZP8 Gm3890-201ENSMUST00000182416 207 ntBASIC8□□□□□ -1.13
Herc1E9PZP8 CT030135.2-201ENSMUST00000225255 893 ntBASIC8□□□□□ -1.13
Herc1E9PZP8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Herc1E9PZP8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm4760-201ENSMUST00000119663 1030 ntBASIC7.99□□□□□ -1.13
Herc1E9PZP8 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm15276-201ENSMUST00000145953 498 ntBASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm44967-201ENSMUST00000207047 631 ntBASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm13316-201ENSMUST00000140537 691 ntBASIC7.99□□□□□ -1.13
Herc1E9PZP8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Herc1E9PZP8 Gm16481-201ENSMUST00000119074 1227 ntBASIC7.98□□□□□ -1.13
Herc1E9PZP8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC7.98□□□□□ -1.13
Herc1E9PZP8 Gm15593-201ENSMUST00000122085 1008 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms