Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm19078-201ENSMUST00000206311 727 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm16570-201ENSMUST00000161951 436 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm43822-201ENSMUST00000200285 476 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm3961-201ENSMUST00000204425 994 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm5425-201ENSMUST00000214125 459 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scaf11E9PZM7 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.11■□□□□ 0.81
Scaf11E9PZM7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Gm45930-201ENSMUST00000221330 292 ntBASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scaf11E9PZM7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Gm12384-201ENSMUST00000119228 919 ntBASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Gm29199-201ENSMUST00000187766 775 ntBASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 BC037039-201ENSMUST00000192003 2205 ntBASIC20.09■□□□□ 0.81
Scaf11E9PZM7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scaf11E9PZM7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Gm4804-201ENSMUST00000182234 999 ntBASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC20.08■□□□□ 0.81
Scaf11E9PZM7 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.08■□□□□ 0.81
Scaf11E9PZM7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.08■□□□□ 0.81
Scaf11E9PZM7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scaf11E9PZM7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scaf11E9PZM7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Scaf11E9PZM7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC20.08■□□□□ 0.8
Scaf11E9PZM7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scaf11E9PZM7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scaf11E9PZM7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm13612-201ENSMUST00000119276 390 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm15376-201ENSMUST00000122258 783 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm10275-202ENSMUST00000168697 495 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm9726-201ENSMUST00000180321 678 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm5276-201ENSMUST00000196683 1047 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm19184-201ENSMUST00000196798 928 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm43118-201ENSMUST00000199149 775 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Gm10275-201ENSMUST00000092620 635 ntBASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms