Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh17E9PXF0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Gm6415-201ENSMUST00000118488 348 ntBASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh17E9PXF0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Gm27618-201ENSMUST00000183671 60 ntBASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh17E9PXF0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 BC037039-201ENSMUST00000192003 2205 ntBASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh17E9PXF0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms