Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Gm27680-201ENSMUST00000184192 160 ntBASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Gm2451-201ENSMUST00000199447 999 ntBASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Gm10290-201ENSMUST00000200451 999 ntBASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.41□□□□□ -0.1
Srp54bE9PXC0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Gm8749-201ENSMUST00000117737 331 ntBASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Srp54bE9PXC0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Srp54bE9PXC0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Shd-206ENSMUST00000225145 998 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms