Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.8■□□□□ 0.76
Tmf1B9EKI3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tmf1B9EKI3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.8■□□□□ 0.76
Tmf1B9EKI3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Tmf1B9EKI3 Gm9252-201ENSMUST00000172364 1602 ntBASIC19.8■□□□□ 0.76
Tmf1B9EKI3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tmf1B9EKI3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Mir7023-201ENSMUST00000185093 64 ntBASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tmf1B9EKI3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Gm5745-201ENSMUST00000183748 313 ntBASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Gm28630-201ENSMUST00000187806 498 ntBASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tmf1B9EKI3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.77■□□□□ 0.76
Tmf1B9EKI3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tmf1B9EKI3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.77■□□□□ 0.75
Tmf1B9EKI3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Gm5566-201ENSMUST00000116118 459 ntBASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tmf1B9EKI3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.75■□□□□ 0.75
Tmf1B9EKI3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms