Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.21□□□□□ -0.13
Clip3B9EHT4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip3B9EHT4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.21□□□□□ -0.14
Clip3B9EHT4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.2□□□□□ -0.14
Clip3B9EHT4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Gm14701-201ENSMUST00000117156 348 ntBASIC14.2□□□□□ -0.14
Clip3B9EHT4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip3B9EHT4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.19□□□□□ -0.14
Clip3B9EHT4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Gm2272-201ENSMUST00000194903 582 ntBASIC14.19□□□□□ -0.14
Clip3B9EHT4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip3B9EHT4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.19□□□□□ -0.14
Clip3B9EHT4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms