Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav21-dv12A0A075B6C4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav21-dv12A0A075B6C4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm13036-201ENSMUST00000117799 748 ntBASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mir5131-201ENSMUST00000175426 93 ntBASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm15590-201ENSMUST00000078419 552 ntBASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav21-dv12A0A075B6C4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm18195-201ENSMUST00000207604 706 ntBASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms