Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Dancr-204ENSMUST00000132389 2347 ntBASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Olfr286-202ENSMUST00000205305 969 ntBASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm19220-201ENSMUST00000222682 803 ntBASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8n-2A0A075B633 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gm11918-201ENSMUST00000121660 179 ntBASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gm12138-201ENSMUST00000122180 951 ntBASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gm37230-201ENSMUST00000194491 818 ntBASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Gm25857-201ENSMUST00000082788 129 ntBASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav8n-2A0A075B633 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms