Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm13464-201ENSMUST00000119418 935 ntBASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-1A0A075B5Z8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm5682-201ENSMUST00000173402 505 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm33142-201ENSMUST00000193913 867 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm6089-201ENSMUST00000197666 938 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms