Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv4A0A075B5I2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gm14042-201ENSMUST00000120139 833 ntBASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gm5479-201ENSMUST00000160578 435 ntBASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Mir3113-201ENSMUST00000175478 76 ntBASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gm45098-201ENSMUST00000207179 657 ntBASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv4A0A075B5I2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv4A0A075B5I2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms