Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb2S4R1M3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Mir8117-201ENSMUST00000184773 107 ntBASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H2afb2S4R1M3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm2451-201ENSMUST00000199447 999 ntBASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm10290-201ENSMUST00000200451 999 ntBASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb2S4R1M3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
H2afb2S4R1M3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
H2afb2S4R1M3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb2S4R1M3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms