Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Gm1401-201ENSMUST00000122048 772 ntBASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Gm27301-201ENSMUST00000184012 127 ntBASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn9Q9Z0S7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn9Q9Z0S7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn9Q9Z0S7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn9Q9Z0S7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn9Q9Z0S7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn9Q9Z0S7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn9Q9Z0S7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms