Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Gm8602-201ENSMUST00000184045 607 ntBASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 AC153522.1-201ENSMUST00000220047 1090 ntBASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx6Q9R1R0 Gm37234-201ENSMUST00000193259 1441 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm25287-201ENSMUST00000103846 110 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm22918-201ENSMUST00000103855 110 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm13453-201ENSMUST00000118708 357 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm13829-201ENSMUST00000119600 138 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm6745-201ENSMUST00000199216 526 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Thap2-203ENSMUST00000218989 527 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 AC147628.1-201ENSMUST00000228193 688 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm44286-201ENSMUST00000204098 1487 ntBASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx6Q9R1R0 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lhx6Q9R1R0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms