Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd2Q9R1A8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.12■□□□□ 0.01
Rfwd2Q9R1A8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd2Q9R1A8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfwd2Q9R1A8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rfwd2Q9R1A8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms