Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Sybu-209ENSMUST00000228639 4113 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm16420-201ENSMUST00000120258 856 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm29107-201ENSMUST00000190910 347 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm43124-201ENSMUST00000201878 278 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 Zmym2-202ENSMUST00000223669 1281 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Gm25857-201ENSMUST00000082788 129 ntBASIC12.96□□□□□ -0.33
Nubp1Q9R060 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp1Q9R060 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.96□□□□□ -0.34
Nubp1Q9R060 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp1Q9R060 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm11478-201ENSMUST00000117851 599 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm15653-201ENSMUST00000119247 907 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm8318-201ENSMUST00000182954 872 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm38018-201ENSMUST00000195651 540 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm9063-201ENSMUST00000223299 582 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.95□□□□□ -0.34
Nubp1Q9R060 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nubp1Q9R060 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Gm12752-201ENSMUST00000121657 811 ntBASIC12.94□□□□□ -0.34
Nubp1Q9R060 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.94□□□□□ -0.34
Nubp1Q9R060 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Gm44855-201ENSMUST00000205725 362 ntBASIC12.94□□□□□ -0.34
Nubp1Q9R060 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms