Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Gm25016-201ENSMUST00000158399 131 ntBASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ube4bQ9ES00 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4bQ9ES00 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube4bQ9ES00 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms