Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.5□□□□□ -0.25
Dap3Q9ER88 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.5□□□□□ -0.25
Dap3Q9ER88 Gm8655-201ENSMUST00000221159 852 ntBASIC13.5□□□□□ -0.25
Dap3Q9ER88 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.5□□□□□ -0.25
Dap3Q9ER88 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.49□□□□□ -0.25
Dap3Q9ER88 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Gm7506-201ENSMUST00000207758 815 ntBASIC13.49□□□□□ -0.25
Dap3Q9ER88 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.49□□□□□ -0.25
Dap3Q9ER88 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.49□□□□□ -0.25
Dap3Q9ER88 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.49□□□□□ -0.25
Dap3Q9ER88 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.49□□□□□ -0.25
Dap3Q9ER88 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dap3Q9ER88 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.48□□□□□ -0.25
Dap3Q9ER88 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Gm12895-201ENSMUST00000122214 226 ntBASIC13.48□□□□□ -0.25
Dap3Q9ER88 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Dap3Q9ER88 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.48□□□□□ -0.25
Dap3Q9ER88 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dap3Q9ER88 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms