Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Gm33320-201ENSMUST00000192232 530 ntBASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Gm9856-201ENSMUST00000217077 2578 ntBASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Syt7-205ENSMUST00000224135 1557 ntBASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Gm21854-201ENSMUST00000179901 471 ntBASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Gm5745-201ENSMUST00000183748 313 ntBASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpsf1Q9EPU4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cpsf1Q9EPU4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Gm15460-201ENSMUST00000118147 391 ntBASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cpsf1Q9EPU4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 AC153872.1-201ENSMUST00000199539 128 ntBASIC20■□□□□ 0.79
Cpsf1Q9EPU4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 AC135669.1-201ENSMUST00000213585 412 ntBASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpsf1Q9EPU4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 AC139350.3-201ENSMUST00000226151 420 ntBASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms