Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdc40Q9DC48 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.61□□□□□ -0.23
Cdc40Q9DC48 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdc40Q9DC48 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Rprl2-201ENSMUST00000157150 290 ntBASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Mir6956-201ENSMUST00000183598 62 ntBASIC13.6□□□□□ -0.23
Cdc40Q9DC48 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.6□□□□□ -0.23
Cdc40Q9DC48 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdc40Q9DC48 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms