Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp2aQ9DB34 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Gm11745-201ENSMUST00000121669 448 ntBASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Gm43575-201ENSMUST00000196420 516 ntBASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp2aQ9DB34 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Gm15483-201ENSMUST00000120338 456 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Gm5867-201ENSMUST00000063197 592 ntBASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp2aQ9DB34 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms