Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Gm13036-201ENSMUST00000117799 748 ntBASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4cQ9D7F7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4cQ9D7F7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gm27628-201ENSMUST00000184911 107 ntBASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 AV026068-213ENSMUST00000223675 1171 ntBASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4cQ9D7F7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms