Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Gm25948-201ENSMUST00000175334 112 ntBASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.3■□□□□ 0.2
Tube1Q9D6T1 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tube1Q9D6T1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.29■□□□□ 0.2
Tube1Q9D6T1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tube1Q9D6T1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 AA543401-201ENSMUST00000164248 1269 ntBASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tube1Q9D6T1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.27■□□□□ 0.2
Tube1Q9D6T1 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.27■□□□□ 0.2
Tube1Q9D6T1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms